Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gh116 family glycosyl hydrolase | CPT03_RS06670 | Not Available | Positive | 1632212 - 1634839 | 97680.2 |
| gtp-binding protein | CPT03_RS06675 | Not Available | Positive | 1634864 - 1635934 | 39863.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CPT03_RS06680 | Not Available | Positive | 1635948 - 1636283 | 12437.7 |
| uxaa family hydrolase | CPT03_RS06685 | Not Available | Positive | 1636326 - 1637984 | 59358.1 |
| fumarylacetoacetate hydrolase family protein | CPT03_RS06690 | Not Available | Positive | 1638025 - 1638876 | 31951.8 |
| aldehyde dehydrogenase (nadp(+)) | CPT03_RS06695 | Not Available | Positive | 1638900 - 1640495 | 57222.7 |
| deoxyguanosinetriphosphate triphosphohydrolase | CPT03_RS06700 | Not Available | Positive | 1640517 - 1641860 | 50686.8 |
| ypda family putative bacillithiol disulfide reductase | CPT03_RS06705 | Not Available | Positive | 1641865 - 1642830 | 35945.0 |
| arac family transcriptional regulator | CPT03_RS06710 | Not Available | Negative | 1642833 - 1643717 | 34579.7 |
| sugar porter family mfs transporter | CPT03_RS06715 | Not Available | Positive | 1643846 - 1645186 | 48841.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

