Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS06620 | Not Available | Negative | 1620609 - 1620980 | 13957.3 |
| helix-turn-helix domain-containing protein | CPT03_RS06625 | Not Available | Negative | 1621110 - 1621904 | 30450.1 |
| tolc family protein | CPT03_RS06630 | Not Available | Positive | 1621988 - 1623313 | 50214.0 |
| hlyd family secretion protein | CPT03_RS06635 | Not Available | Positive | 1623315 - 1624379 | 39372.2 |
| mfs transporter | CPT03_RS06640 | Not Available | Positive | 1624376 - 1625971 | 60164.8 |
| duf3078 domain-containing protein | CPT03_RS06645 | Not Available | Negative | 1626102 - 1626998 | 33796.3 |
| substrate-binding domain-containing protein | CPT03_RS06650 | Not Available | Positive | 1627176 - 1628216 | 38771.8 |
| glycoside hydrolase family 172 protein | CPT03_RS06655 | Not Available | Positive | 1628444 - 1629610 | 43962.2 |
| duf6786 family protein | CPT03_RS06660 | Not Available | Positive | 1629638 - 1630867 | 45234.0 |
| l-fucose:h+ symporter permease | CPT03_RS06665 | Not Available | Positive | 1630879 - 1632189 | 47903.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

