Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | CPT03_RS06570 | Not Available | Positive | 1609532 - 1610248 | 26982.7 |
| mfs transporter | CPT03_RS06575 | Not Available | Negative | 1610256 - 1611470 | 44803.2 |
| mfs transporter | CPT03_RS06580 | Not Available | Positive | 1611609 - 1612808 | 44546.0 |
| chromate efflux transporter | CPT03_RS06585 | Not Available | Positive | 1612840 - 1614051 | 43830.6 |
| sulfotransferase family protein | CPT03_RS06590 | Not Available | Positive | 1614080 - 1615096 | 38451.1 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | CPT03_RS06595 | Not Available | Positive | 1615101 - 1615865 | 28205.8 |
| adenylyl-sulfate kinase | CPT03_RS06600 | Not Available | Negative | 1615862 - 1616407 | 20353.4 |
| mfs transporter | CPT03_RS06605 | Not Available | Positive | 1616452 - 1617633 | 41952.6 |
| yfho family protein | CPT03_RS06610 | Not Available | Positive | 1617630 - 1620122 | 93206.5 |
| duf4268 domain-containing protein | CPT03_RS06615 | Not Available | Positive | 1620140 - 1620601 | 18085.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

