Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS22890 | Not Available | Negative | 1573076 - 1573243 | 6358.07 |
| cytochrome-c oxidase, cbb3-type subunit i | CPT03_RS06425 | Not Available | Negative | 1573251 - 1575362 | 80254.2 |
| cbb3-type cytochrome oxidase assembly protein ccos | CPT03_RS06430 | Not Available | Negative | 1575432 - 1575614 | 7039.54 |
| heavy metal translocating p-type atpase | CPT03_RS06435 | Not Available | Negative | 1575605 - 1578007 | 90283.9 |
| rna polymerase sigma factor rpod/siga | CPT03_RS06440 | Not Available | Negative | 1578100 - 1578963 | 32783.0 |
| formylglycine-generating enzyme family protein | CPT03_RS06445 | Not Available | Negative | 1579160 - 1580278 | 41388.1 |
| sugar phosphate isomerase/epimerase family protein | CPT03_RS06450 | Not Available | Negative | 1580746 - 1581597 | 31762.2 |
| hypothetical protein | CPT03_RS06455 | Not Available | Negative | 1581730 - 1582596 | 32163.8 |
| energy transducer tonb | CPT03_RS06460 | Not Available | Positive | 1582657 - 1583103 | 15891.3 |
| hypothetical protein | CPT03_RS23050 | Not Available | Positive | 1583315 - 1583515 | 7549.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

