Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding domain-containing protein | CPT03_RS00615 | Not Available | Negative | 152075 - 153163 | 41294.0 |
| hypothetical protein | CPT03_RS00620 | Not Available | Negative | 153182 - 154132 | 34614.8 |
| hypothetical protein | CPT03_RS00625 | Not Available | Negative | 154181 - 155410 | 44968.3 |
| rna polymerase sigma factor | CPT03_RS00630 | Not Available | Negative | 155407 - 155958 | 21439.1 |
| hypothetical protein | CPT03_RS00635 | Not Available | Negative | 155962 - 156294 | 12485.0 |
| phosphocholine-specific phospholipase c | CPT03_RS00640 | Not Available | Negative | 156838 - 159267 | 92053.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | CPT03_RS00645 | Not Available | Negative | 159343 - 160833 | 56471.7 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS00650 | Not Available | Negative | 160862 - 164005 | 116757.0 |
| dead/deah box helicase | CPT03_RS00655 | Not Available | Positive | 164195 - 165487 | 47652.3 |
| aryl-sulfate sulfotransferase | CPT03_RS00660 | Not Available | Negative | 165484 - 166887 | 54174.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

