Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CPT03_RS06375 | Not Available | Positive | 1563364 - 1563621 | 9863.19 |
| hypothetical protein | CPT03_RS06380 | Not Available | Negative | 1563634 - 1565460 | 69463.7 |
| pas domain-containing sensor histidine kinase | CPT03_RS06385 | Not Available | Positive | 1565590 - 1566780 | 44570.5 |
| response regulator | CPT03_RS06390 | Not Available | Positive | 1566780 - 1567841 | 40095.7 |
| lactate dehydrogenase | CPT03_RS06395 | Not Available | Positive | 1567923 - 1568396 | 17463.9 |
| oxygen-independent coproporphyrinogen iii oxidase | CPT03_RS06400 | Not Available | Positive | 1568386 - 1569750 | 52293.9 |
| sulfite exporter taue/safe family protein | CPT03_RS06405 | Not Available | Negative | 1569762 - 1570448 | 25148.9 |
| fixh family protein | CPT03_RS06410 | Not Available | Negative | 1570445 - 1570873 | 16310.1 |
| cytochrome c oxidase accessory protein ccog | CPT03_RS06415 | Not Available | Negative | 1570879 - 1572279 | 53609.4 |
| cbb3-type cytochrome c oxidase n-terminal domain-containing protein | CPT03_RS06420 | Not Available | Negative | 1572282 - 1573079 | 29232.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

