Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | CPT03_RS06325 | Not Available | Positive | 1550996 - 1552144 | 43510.4 |
| gnat family n-acetyltransferase | CPT03_RS06330 | Not Available | Positive | 1552200 - 1553234 | 40257.0 |
| phytanoyl-coa dioxygenase family protein | CPT03_RS06335 | Not Available | Positive | 1553253 - 1554056 | 31185.1 |
| hypothetical protein | CPT03_RS06340 | Not Available | Positive | 1554117 - 1555091 | 38206.9 |
| gnat family n-acetyltransferase | CPT03_RS06345 | Not Available | Positive | 1555088 - 1556635 | 60376.2 |
| polysaccharide biosynthesis protein | CPT03_RS06350 | Not Available | Positive | 1556664 - 1558616 | 73918.7 |
| helix-turn-helix domain-containing protein | CPT03_RS06355 | Not Available | Positive | 1558680 - 1559771 | 42125.8 |
| hypothetical protein | CPT03_RS06360 | Not Available | Positive | 1559980 - 1560327 | 13781.3 |
| hypothetical protein | CPT03_RS06365 | Not Available | Positive | 1560680 - 1561114 | 16551.9 |
| sensor histidine kinase | CPT03_RS06370 | Not Available | Positive | 1561195 - 1563189 | 75531.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

