Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | CPT03_RS06275 | Not Available | Positive | 1538662 - 1539741 | 42887.7 |
| o-antigen ligase family protein | CPT03_RS06280 | Not Available | Positive | 1539753 - 1540967 | 46418.5 |
| glycosyltransferase | CPT03_RS06285 | Not Available | Positive | 1540975 - 1542138 | 44440.1 |
| pyridoxal phosphate-dependent aminotransferase | CPT03_RS06290 | Not Available | Positive | 1542150 - 1543355 | 46141.7 |
| hypothetical protein | CPT03_RS06295 | Not Available | Positive | 1543339 - 1543944 | 23727.8 |
| atp-grasp domain-containing protein | CPT03_RS06300 | Not Available | Positive | 1543880 - 1544938 | 41657.4 |
| glycosyltransferase family 4 protein | CPT03_RS06305 | Not Available | Positive | 1544975 - 1546048 | 40954.5 |
| asparagine synthase (glutamine-hydrolyzing) | CPT03_RS06310 | Not Available | Positive | 1546061 - 1547896 | 70066.6 |
| nad-dependent epimerase | CPT03_RS06315 | Not Available | Positive | 1547935 - 1549029 | 41280.6 |
| polysaccharide lyase family 1 protein | CPT03_RS06320 | Not Available | Positive | 1549474 - 1550874 | 50059.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

