Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide biosynthesis/export family protein | CPT03_RS06225 | Not Available | Positive | 1527361 - 1528095 | 26966.8 |
| gumc family protein | CPT03_RS06230 | Not Available | Positive | 1528125 - 1530419 | 86466.0 |
| upxy family transcription antiterminator | CPT03_RS06235 | Not Available | Positive | 1530604 - 1531131 | 20517.4 |
| acyltransferase family protein | CPT03_RS06240 | Not Available | Positive | 1531150 - 1532151 | 39087.1 |
| lipopolysaccharide biosynthesis protein | CPT03_RS06245 | Not Available | Positive | 1532161 - 1533603 | 54384.2 |
| degt/dnrj/eryc1/strs family aminotransferase | CPT03_RS06250 | Not Available | Positive | 1533600 - 1534769 | 44178.3 |
| glycosyltransferase family 2 protein | CPT03_RS06255 | Not Available | Positive | 1534793 - 1535656 | 33241.1 |
| glycosyltransferase family 4 protein | CPT03_RS06260 | Not Available | Positive | 1535650 - 1536756 | 41946.1 |
| degt/dnrj/eryc1/strs family aminotransferase | CPT03_RS06265 | Not Available | Positive | 1536816 - 1538057 | 46091.9 |
| sugar transferase | CPT03_RS06270 | Not Available | Positive | 1538069 - 1538665 | 22844.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

