Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS06075 | Not Available | Negative | 1484020 - 1485117 | 42626.8 |
| sigma factor-like helix-turn-helix dna-binding protein | CPT03_RS06080 | Not Available | Negative | 1485117 - 1485923 | 32112.1 |
| hypothetical protein | CPT03_RS06085 | Not Available | Positive | 1486287 - 1486607 | 12395.1 |
| voc family protein | CPT03_RS06090 | Not Available | Positive | 1487083 - 1487490 | 14756.7 |
| tfox/sxy family protein | CPT03_RS06095 | Not Available | Negative | 1487521 - 1487853 | 12264.9 |
| mg2 domain-containing protein | CPT03_RS06100 | Not Available | Negative | 1488230 - 1494391 | 233423.0 |
| hypothetical protein | CPT03_RS06105 | Not Available | Positive | 1494607 - 1494816 | 7892.55 |
| gnat family n-acetyltransferase | CPT03_RS06110 | Not Available | Negative | 1494847 - 1495353 | 19192.6 |
| serine hydrolase domain-containing protein | CPT03_RS06115 | Not Available | Positive | 1495432 - 1497120 | 63518.5 |
| alpha/beta fold hydrolase | CPT03_RS06120 | Not Available | Negative | 1497128 - 1498066 | 34752.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

