Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | CPT03_RS06025 | Not Available | Negative | 1476498 - 1476962 | 17604.8 |
| hypothetical protein | CPT03_RS06030 | Not Available | Positive | 1477292 - 1477690 | 14685.6 |
| hypothetical protein | CPT03_RS06035 | Not Available | Positive | 1477693 - 1478940 | 46059.0 |
| secondary thiamine-phosphate synthase enzyme yjbq | CPT03_RS06040 | Not Available | Positive | 1479033 - 1479464 | 16442.5 |
| hypothetical protein | CPT03_RS06045 | Not Available | Negative | 1479457 - 1479909 | 16792.0 |
| hypothetical protein | CPT03_RS06050 | Not Available | Positive | 1480309 - 1481067 | 30202.1 |
| dna-binding protein | CPT03_RS06055 | Not Available | Positive | 1481170 - 1481418 | 9574.86 |
| plasmid mobilization protein | CPT03_RS06060 | Not Available | Positive | 1481457 - 1481834 | 14216.6 |
| relaxase/mobilization nuclease domain-containing protein | CPT03_RS06065 | Not Available | Positive | 1481831 - 1482685 | 32747.7 |
| hypothetical protein | CPT03_RS06070 | Not Available | Positive | 1482696 - 1483124 | 16336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

