Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS05980 | Not Available | Positive | 1465852 - 1467933 | 77290.6 |
| hypothetical protein | CPT03_RS23040 | Not Available | Positive | 1468147 - 1468347 | 7345.63 |
| srpbcc family protein | CPT03_RS23045 | Not Available | Positive | 1468364 - 1468597 | 8891.79 |
| helix-turn-helix domain-containing protein | CPT03_RS05990 | Not Available | Positive | 1468739 - 1469344 | 22948.6 |
| ricin domain-containing protein | CPT03_RS05995 | Not Available | Negative | 1469379 - 1469879 | 19019.1 |
| hypothetical protein | CPT03_RS06000 | Not Available | Positive | 1469984 - 1470484 | 18210.0 |
| leucine-rich repeat domain-containing protein | CPT03_RS06005 | Not Available | Negative | 1470500 - 1473352 | 108764.0 |
| hypothetical protein | CPT03_RS06010 | Not Available | Positive | 1473510 - 1474154 | 24682.4 |
| hypothetical protein | CPT03_RS06015 | Not Available | Negative | 1474196 - 1474783 | 23107.9 |
| sensor histidine kinase | CPT03_RS06020 | Not Available | Positive | 1475041 - 1476390 | 51247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

