Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glxa family transcriptional regulator | CPT03_RS05930 | Not Available | Negative | 1450540 - 1451517 | 36679.4 |
| hypothetical protein | CPT03_RS05935 | Not Available | Negative | 1451554 - 1452141 | 23142.3 |
| duf6644 family protein | CPT03_RS05940 | Not Available | Negative | 1452259 - 1452744 | 18082.9 |
| duf6152 family protein | CPT03_RS05945 | Not Available | Negative | 1452747 - 1453100 | 13736.8 |
| gntr family transcriptional regulator | CPT03_RS05950 | Not Available | Negative | 1453160 - 1454137 | 37451.8 |
| beta-l-arabinofuranosidase domain-containing protein | CPT03_RS05955 | Not Available | Positive | 1454267 - 1458751 | 167184.0 |
| discoidin domain-containing protein | CPT03_RS05960 | Not Available | Negative | 1458814 - 1460421 | 57886.4 |
| glycosyl hydrolase | CPT03_RS05965 | Not Available | Positive | 1460788 - 1464054 | 120650.0 |
| hypothetical protein | CPT03_RS05970 | Not Available | Negative | 1464072 - 1464431 | 13582.4 |
| fg-gap repeat domain-containing protein | CPT03_RS05975 | Not Available | Negative | 1464457 - 1465674 | 44881.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

