Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS05830 | Not Available | Positive | 1429136 - 1430230 | 40122.6 |
| pvc-type heme-binding cxxch protein | CPT03_RS05835 | Not Available | Positive | 1430346 - 1433891 | 131939.0 |
| fg-gap repeat domain-containing protein | CPT03_RS05840 | Not Available | Positive | 1433923 - 1435113 | 45057.9 |
| hypothetical protein | CPT03_RS05845 | Not Available | Positive | 1435152 - 1435928 | 29543.7 |
| glycosyl hydrolase family 8 | CPT03_RS05850 | Not Available | Positive | 1435934 - 1437166 | 46511.1 |
| rna polymerase sigma factor | CPT03_RS05855 | Not Available | Positive | 1437239 - 1437715 | 18970.0 |
| hypothetical protein | CPT03_RS05860 | Not Available | Positive | 1437718 - 1438275 | 21002.2 |
| cold-shock protein | CPT03_RS05865 | Not Available | Negative | 1438381 - 1438572 | 6902.16 |
| hypothetical protein | CPT03_RS05870 | Not Available | Negative | 1438671 - 1438880 | 7487.57 |
| hypothetical protein | CPT03_RS05875 | Not Available | Positive | 1439054 - 1439521 | 17318.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

