Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | CPT03_RS05440 | Not Available | Negative | 1335857 - 1336510 | 24572.6 |
| hypothetical protein | CPT03_RS23235 | Not Available | Positive | 1336601 - 1336726 | 4785.73 |
| beta-ketoacyl-acp synthase iii | CPT03_RS05445 | Not Available | Positive | 1336743 - 1337756 | 36937.0 |
| acyl-coa thioesterase | CPT03_RS05450 | Not Available | Positive | 1337756 - 1338142 | 14404.4 |
| hypothetical protein | CPT03_RS05455 | Not Available | Positive | 1338143 - 1338520 | 14457.0 |
| membrane lipoprotein lipid attachment site-containing protein | CPT03_RS05460 | Not Available | Positive | 1338711 - 1339154 | 17029.8 |
| sco family protein | CPT03_RS05465 | Not Available | Positive | 1339154 - 1339792 | 23967.8 |
| zinc metallopeptidase | CPT03_RS05470 | Not Available | Positive | 1339920 - 1340618 | 25648.2 |
| dead/deah box helicase | CPT03_RS05475 | Not Available | Positive | 1340666 - 1343596 | 112791.0 |
| duf4185 domain-containing protein | CPT03_RS05480 | Not Available | Positive | 1343603 - 1344703 | 40693.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

