Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase family protein | CPT03_RS00515 | Not Available | Positive | 123231 - 124187 | 35092.5 |
| gliding motility-associated c-terminal domain-containing protein | CPT03_RS00520 | Not Available | Positive | 124299 - 127700 | 121434.0 |
| cbu_0592 family membrane protein | CPT03_RS23320 | Not Available | Positive | 127772 - 128026 | 9299.53 |
| tetr family transcriptional regulator | CPT03_RS00530 | Not Available | Negative | 127994 - 128620 | 24306.8 |
| susc/raga family tonb-linked outer membrane protein | CPT03_RS00535 | Not Available | Positive | 128810 - 132010 | 118606.0 |
| ragb/susd family nutrient uptake outer membrane protein | CPT03_RS00540 | Not Available | Positive | 132044 - 133834 | 67411.0 |
| metallophosphoesterase family protein | CPT03_RS00545 | Not Available | Positive | 133867 - 134790 | 34912.2 |
| alkaline phosphatase family protein | CPT03_RS00550 | Not Available | Positive | 134795 - 136036 | 47094.6 |
| yybh family protein | CPT03_RS00555 | Not Available | Positive | 136090 - 136461 | 13884.4 |
| 2-hydroxyacid dehydrogenase | CPT03_RS00560 | Not Available | Positive | 136468 - 137451 | 36446.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

