Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | CPT03_RS05245 | Not Available | Positive | 1287907 - 1289691 | 65367.9 |
| sigma-54-dependent transcriptional regulator | CPT03_RS05250 | Not Available | Negative | 1289725 - 1291134 | 52391.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1291236 - 1291612 | Not Available |
| hypothetical protein | CPT03_RS05260 | Not Available | Negative | 1291656 - 1292294 | 23986.6 |
| rna polymerase sigma factor | CPT03_RS05265 | Not Available | Negative | 1292368 - 1293012 | 25317.7 |
| grea/greb family elongation factor | CPT03_RS05270 | Not Available | Negative | 1293145 - 1293552 | 15387.8 |
| crp/fnr family transcriptional regulator | CPT03_RS05275 | Not Available | Positive | 1294198 - 1294887 | 25862.9 |
| hypothetical protein | CPT03_RS05280 | Not Available | Negative | 1294891 - 1295295 | 14320.0 |
| molybdenum cofactor guanylyltransferase | CPT03_RS05285 | Not Available | Negative | 1295319 - 1295900 | 22065.7 |
| molybdenum cofactor biosynthesis protein moae | CPT03_RS05290 | Not Available | Negative | 1295897 - 1296367 | 17486.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

