Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter ginsengisoli |
| Strain | strain T01R-27 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1674046 bp
Thymine Count
1667241 bp
Guanine Count
1014742 bp
Cytosine Count
1017331 bp
Genome Length
5373360 bp
Protein-coding Genes
4490 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CPT03_RS04945 | Not Available | Negative | 1215396 - 1215935 | 20805.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | CPT03_RS04950 | Not Available | Negative | 1215932 - 1216666 | 27511.1 |
| deoxynucleoside kinase | CPT03_RS04955 | Not Available | Negative | 1216667 - 1217281 | 23695.2 |
| tryptophan--trna ligase | CPT03_RS04960 | Not Available | Negative | 1217327 - 1218325 | 37734.9 |
| lysophospholipid acyltransferase family protein | CPT03_RS04965 | Not Available | Positive | 1218464 - 1219195 | 28308.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | CPT03_RS04970 | Not Available | Positive | 1219192 - 1219482 | 11106.5 |
| abc transporter atp-binding protein | CPT03_RS04975 | Not Available | Positive | 1219534 - 1220292 | 27729.5 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CPT03_RS04980 | Not Available | Positive | 1220301 - 1220849 | 20841.3 |
| duf2795 domain-containing protein | CPT03_RS04985 | Not Available | Positive | 1220934 - 1221155 | 8587.66 |
| lmo0937 family membrane protein | CPT03_RS22765 | Not Available | Positive | 1221292 - 1221453 | 5703.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

