Citrobacter farmeri strain AUSMDU00008141

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter farmeri strain AUSMDU00008141 is a Gram-negative, rod-shaped bacterium known to inhabit various environments associated with human activities, specifically shower and washbasin drains, as well as wastewater drainage systems. The presence of flagella indicates motility, which may facilitate its movement within these aquatic environments. This strain is characterized by having two replicons, which are circular DNA molecules that can contribute to its genetic diversity and adaptability. C. farmeri is primarily associated with Homo sapiens, suggesting a potential role in the human microbiome or its impact on human health, especially in environments where humans frequently interact with water systems. The isolation of C. farmeri from domestic settings highlights its ecological niche and potential implications for water quality and hygiene. As a member of the Enterobacteriaceae family, it may play a role in the microbial community dynamics of wastewater systems, contributing to nutrient cycling and influencing the presence of other microorganisms. Understanding the characteristics and behavior of C. farmeri strain AUSMDU00008141 can provide insights into the microbiological processes occurring in human-associated aquatic environments and their broader implications for public health and sanitation practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter farmeri
Strainstrain AUSMDU00008141

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter farmeri strain AUSMDU00008141
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatshower; washbasin drains; wastewater drainage
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter farmeri strain AUSMDU00008141


Gene Summary

Adenine Count

33937 bp

Thymine Count

35554 bp

Guanine Count

39436 bp

Cytosine Count

40280 bp

Genome Length

149207 bp

Protein-coding Genes

158 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive671020 - 671031Not Available
IntegraseCI104_RS03415Not AvailableNegative671374 - 67242939780.2
Repressor ciCI104_RS03425Not AvailableNegative672656 - 67327022752.1
Regulatory proteinCI104_RS03430Not AvailablePositive673372 - 6736088901.99
Bacteriophage regulatory protein ciiCI104_RS03435Not AvailablePositive673643 - 67415218290.2
Hypothetical proteinCI104_RS03440Not AvailablePositive674160 - 6743607620.34
Hypothetical proteinCI104_RS03445Not AvailablePositive674324 - 67466512772.5
Hypothetical proteinCI104_RS03450Not AvailablePositive674733 - 6749668664.28
Trar/dksa family transcriptional regulatorCI104_RS03455Not AvailablePositive674966 - 6751938295.04
Dna adenine methylaseCI104_RS03460Not AvailablePositive675190 - 67604732312.3

Displaying genes 1 – 10 of 5117 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.