Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | CFA70_RS00855 | Not Available | Negative | 152826 - 153794 | 36905.4 |
| duf968 domain-containing protein | CFA70_RS29495 | Not Available | Negative | 199347 - 199442 | 3845.7 |
| hydrolase | CFA70_RS01205 | Not Available | Negative | 199439 - 200005 | 20524.5 |
| aspartate--trna ligase | CFA70_RS01210 | Not Available | Positive | 200294 - 202066 | 65696.9 |
| dihydroneopterin triphosphate diphosphatase | CFA70_RS01215 | Not Available | Positive | 202068 - 202511 | 17023.2 |
| yebc/pmpr family dna-binding transcriptional regulator | CFA70_RS01220 | Not Available | Positive | 202540 - 203283 | 26485.0 |
| crossover junction endodeoxyribonuclease ruvc | CFA70_RS01225 | Not Available | Positive | 203318 - 203839 | 18779.9 |
| holliday junction branch migration protein ruva | CFA70_RS01230 | Not Available | Positive | 203920 - 204531 | 22133.0 |
| holliday junction branch migration dna helicase ruvb | CFA70_RS01235 | Not Available | Positive | 204540 - 205550 | 37177.1 |
| zinc abc transporter permease subunit znub | CFA70_RS01240 | Not Available | Negative | 205629 - 206414 | 27759.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

