Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | CFA70_RS00520 | Not Available | Negative | 83638 - 83838 | 7581.07 |
| site-specific integrase | CFA70_RS00525 | Not Available | Negative | 83981 - 84574 | 22331.9 |
| is5-like element is5 family transposase | CFA70_RS00535 | Not Available | Negative | 84844 - 85824 | 37853.6 |
| hypothetical protein | CFA70_RS00545 | Not Available | Negative | 85870 - 86316 | 17327.1 |
| hypothetical protein | CFA70_RS00550 | Not Available | Negative | 86460 - 87590 | 43064.5 |
| hypothetical protein | CFA70_RS00555 | Not Available | Negative | 88097 - 89329 | 47897.2 |
| type i restriction-modification system subunit m | CFA70_RS00560 | Not Available | Positive | 89635 - 91158 | 57032.6 |
| restriction endonuclease subunit s | CFA70_RS00565 | Not Available | Positive | 91148 - 92395 | 46886.5 |
| yeca family protein | CFA70_RS00570 | Not Available | Positive | 92392 - 93075 | 25655.9 |
| type i restriction endonuclease subunit r | CFA70_RS00575 | Not Available | Positive | 93128 - 96412 | 124208.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

