Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | CFA70_RS00470 | Not Available | Positive | 73044 - 74261 | 46077.2 |
| hypothetical protein | CFA70_RS00480 | Not Available | Positive | 74622 - 74993 | 14086.0 |
| hypothetical protein | CFA70_RS00485 | Not Available | Positive | 75019 - 75552 | 19596.4 |
| duf2787 family protein | CFA70_RS00490 | Not Available | Positive | 75625 - 76059 | 17020.2 |
| duf726 domain-containing protein | CFA70_RS00495 | Not Available | Negative | 76670 - 77488 | 30931.6 |
| helix-turn-helix transcriptional regulator | CFA70_RS00500 | Not Available | Negative | 77549 - 78421 | 33506.4 |
| is630-like element isec33 family transposase | CFA70_RS00505 | Not Available | Negative | 78402 - 79433 | 39607.2 |
| hypothetical protein | CFA70_RS28975 | Not Available | Positive | 79985 - 80311 | 12412.9 |
| hypothetical protein | CFA70_RS00510 | Not Available | Negative | 80360 - 82960 | 97819.4 |
| hypothetical protein | CFA70_RS00515 | Not Available | Negative | 83010 - 83648 | 23893.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

