Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | CFA70_RS00360 | Not Available | Negative | 56309 - 57796 | 56465.8 |
| flagella biosynthesis regulatory protein flit | CFA70_RS00365 | Not Available | Negative | 57865 - 58236 | 13947.8 |
| flagellar export chaperone flis | CFA70_RS00370 | Not Available | Negative | 58236 - 58643 | 14581.3 |
| flagellar filament capping protein flid | CFA70_RS00375 | Not Available | Negative | 58659 - 60062 | 49574.1 |
| flic/fljb family flagellin | CFA70_RS00385 | Not Available | Positive | 60318 - 61811 | 51376.4 |
| rna polymerase sigma factor flia | CFA70_RS00390 | Not Available | Positive | 61974 - 62693 | 27461.8 |
| flagella biosynthesis regulatory protein fliz | CFA70_RS00395 | Not Available | Positive | 62751 - 63302 | 21726.9 |
| cystine abc transporter substrate-binding protein | CFA70_RS00400 | Not Available | Positive | 63403 - 64203 | 29000.1 |
| d-cysteine desulfhydrase | CFA70_RS00405 | Not Available | Positive | 64312 - 65298 | 35200.4 |
| cystine abc transporter permease | CFA70_RS00410 | Not Available | Positive | 65320 - 65988 | 24792.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

