Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin ompc | CFA70_RS00210 | Not Available | Negative | 31736 - 32914 | 42993.3 |
| phosphohydrolase | CFA70_RS00215 | Not Available | Positive | 33356 - 34048 | 26106.1 |
| dna cytosine methyltransferase | CFA70_RS00220 | Not Available | Positive | 34125 - 35555 | 54295.5 |
| very short patch repair endonuclease | CFA70_RS00225 | Not Available | Positive | 35536 - 36003 | 17806.3 |
| drug/metabolite exporter yeda | CFA70_RS00230 | Not Available | Negative | 35995 - 36915 | 32432.1 |
| duf968 domain-containing protein | CFA70_RS00235 | Not Available | Positive | 37094 - 38004 | 32714.7 |
| yodc family protein | CFA70_RS00240 | Not Available | Positive | 38082 - 38267 | 6890.17 |
| yodd family peroxide/acid resistance protein | CFA70_RS00245 | Not Available | Negative | 38474 - 38701 | 8677.87 |
| protein dsrb | CFA70_RS00250 | Not Available | Positive | 38865 - 39053 | 7004.31 |
| transcriptional regulator rcsa | CFA70_RS00255 | Not Available | Negative | 39108 - 39731 | 23414.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

