Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | CFA70_RS29740 | Not Available | Positive | 4424733 - 4424966 | 8610.42 |
| Tail assembly chaperone | CFA70_RS22680 | Not Available | Positive | 4424953 - 4425210 | 9618.82 |
| Tail tape measure protein | CFA70_RS22685 | Not Available | Positive | 4425398 - 4427437 | 72237.2 |
| Hypothetical protein | CFA70_RS22690 | Not Available | Positive | 4427434 - 4427763 | 12235.4 |
| Baseplate j/gp47 family protein | CFA70_RS22695 | Not Available | Positive | 4427760 - 4428944 | 43220.3 |
| Hypothetical protein | CFA70_RS22700 | Not Available | Positive | 4428937 - 4429524 | 22458.0 |
| Tail fiber protein | CFA70_RS29745 | Not Available | Positive | 4429535 - 4431412 | 67915.6 |
| Is30 family transposase | CFA70_RS22710 | Not Available | Positive | 4431357 - 4432304 | 35828.8 |
| Tail fiber assembly protein | CFA70_RS22715 | Not Available | Positive | 4432806 - 4433261 | 17318.1 |
| Hypothetical protein | CFA70_RS22720 | Not Available | Positive | 4433251 - 4433976 | 25267.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

