Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative terminase endonuclease subunit | CFA70_RS22625 | Not Available | Positive | 4419617 - 4420315 | 26122.9 |
| Gp32 | CFA70_RS22630 | Not Available | Positive | 4420334 - 4420525 | 6897.02 |
| Head completion/stabilization protein | CFA70_RS22635 | Not Available | Positive | 4420619 - 4421071 | 16193.2 |
| Tail protein | CFA70_RS22640 | Not Available | Positive | 4421068 - 4421550 | 18507.1 |
| Putative tail completion protein | CFA70_RS22645 | Not Available | Positive | 4421547 - 4422251 | 26977.9 |
| Tail sheath | CFA70_RS22650 | Not Available | Positive | 4422248 - 4423375 | 40551.2 |
| Putative tail tube protein | CFA70_RS22655 | Not Available | Positive | 4423372 - 4423827 | 16215.2 |
| Holin gp22 | CFA70_RS22660 | Not Available | Positive | 4423840 - 4424136 | 10302.9 |
| M15 family peptidase | CFA70_RS22665 | Not Available | Positive | 4424133 - 4424474 | 12806.1 |
| Hypothetical protein | CFA70_RS22670 | Not Available | Positive | 4424474 - 4424806 | 12117.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

