Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | CFA70_RS15145 | Not Available | Positive | 2955364 - 2955699 | 11814.0 |
| Attl | Not Available | Not Available | Positive | 2955423 - 2955435 | Not Available |
| Hypothetical protein | CFA70_RS29655 | Not Available | Positive | 2955750 - 2955824 | 2672.14 |
| Tail length tape-measure protein | CFA70_RS15155 | Not Available | Positive | 2955825 - 2958758 | 105060.0 |
| Tail protein | CFA70_RS15160 | Not Available | Positive | 2958768 - 2959217 | 16986.5 |
| Tail fiber assembly protein | CFA70_RS15165 | Not Available | Negative | 2959356 - 2959565 | 7786.15 |
| Hypothetical protein | CFA70_RS15170 | Not Available | Negative | 2959597 - 2959878 | 10218.0 |
| Phage tail fiber protein | CFA70_RS29660 | Not Available | Negative | 2959878 - 2961533 | 56412.8 |
| Tail fibers protein | CFA70_RS15180 | Not Available | Negative | 2961523 - 2962137 | 22754.0 |
| Baseplate assembly protein j | CFA70_RS15185 | Not Available | Negative | 2962130 - 2963041 | 33300.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

