Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber assembly protein | CFA70_RS07490 | Not Available | Negative | 1436970 - 1437506 | 20480.8 |
| Tail fiber protein | CFA70_RS07495 | Not Available | Negative | 1437518 - 1439614 | 76148.4 |
| Hypothetical protein | CFA70_RS07500 | Not Available | Negative | 1439624 - 1440211 | 22350.9 |
| Baseplate j/gp47 family protein | CFA70_RS07505 | Not Available | Negative | 1440204 - 1441388 | 43132.2 |
| Hypothetical protein | CFA70_RS07510 | Not Available | Negative | 1441385 - 1441714 | 12239.5 |
| Tail tape measure protein | CFA70_RS07515 | Not Available | Negative | 1441711 - 1443771 | 73024.4 |
| Is30 family transposase | CFA70_RS07520 | Not Available | Negative | 1444047 - 1444994 | 35828.8 |
| hypothetical protein | CFA70_RS29285 | Not Available | Positive | 1444935 - 1445135 | 7429.16 |
| Tail assembly chaperone | CFA70_RS07525 | Not Available | Negative | 1445085 - 1445306 | 8243.14 |
| Hypothetical protein | CFA70_RS29575 | Not Available | Negative | 1445293 - 1445481 | 7150.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

