Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | CFA70_RS28890 | Not Available | Negative | 34438 - 35571 | 42565.4 |
| is1380-like element isecp1 family transposase | CFA70_RS28895 | Not Available | Negative | 35842 - 37104 | 48559.7 |
| is1380 family transposase | CFA70_RS29210 | Not Available | Negative | 37292 - 37447 | 5918.07 |
| hypothetical protein | CFA70_RS29215 | Not Available | Positive | 37709 - 37903 | 7427.83 |
| hypothetical protein | CFA70_RS28900 | Not Available | Positive | 37975 - 38307 | 12703.3 |
| recombinase family protein | CFA70_RS28905 | Not Available | Positive | 38494 - 39102 | 23115.8 |
| ribbon-helix-helix domain-containing protein | CFA70_RS28910 | Not Available | Negative | 39099 - 39284 | 6905.38 |
| hypothetical protein | CFA70_RS28915 | Not Available | Negative | 39569 - 39877 | 11138.1 |
| hypothetical protein | CFA70_RS28920 | Not Available | Negative | 39881 - 40219 | 12402.0 |
| hypothetical protein | CFA70_RS28925 | Not Available | Negative | 40216 - 40566 | 13314.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

