Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase d family protein | CFA70_RS28745 | Not Available | Positive | 11820 - 12332 | 19056.8 |
| hypothetical protein | CFA70_RS28750 | Not Available | Positive | 12329 - 12640 | 11865.2 |
| hypothetical protein | CFA70_RS28755 | Not Available | Negative | 13260 - 13622 | 13634.7 |
| duf6710 family protein | CFA70_RS28760 | Not Available | Negative | 13615 - 14280 | 24982.8 |
| mobf family relaxase | CFA70_RS28765 | Not Available | Negative | 14277 - 17495 | 118903.0 |
| type iv secretion system dna-binding domain-containing protein | CFA70_RS28770 | Not Available | Negative | 17500 - 19032 | 57916.2 |
| hypothetical protein | CFA70_RS29945 | Not Available | Negative | 19032 - 19508 | 18041.8 |
| plasmid stabilization protein stba | CFA70_RS28780 | Not Available | Positive | 19923 - 20354 | 16148.0 |
| stbb family protein | CFA70_RS28785 | Not Available | Positive | 20363 - 21079 | 26582.6 |
| plasmid stabilization protein stbc | CFA70_RS28790 | Not Available | Positive | 21082 - 21450 | 13484.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

