Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macro domain-containing protein | CFA70_RS26285 | Not Available | Negative | 5179144 - 5179980 | 32120.9 |
| tir domain-containing protein | CFA70_RS26290 | Not Available | Positive | 5180118 - 5180627 | 19208.6 |
| hypothetical protein | CFA70_RS26295 | Not Available | Negative | 5180768 - 5181244 | 18380.2 |
| mobq family relaxase | CFA70_RS26300 | Not Available | Negative | 5181324 - 5182817 | 56406.4 |
| hypothetical protein | CFA70_RS26305 | Not Available | Positive | 5183679 - 5184161 | 18893.7 |
| hypothetical protein | CFA70_RS26310 | Not Available | Positive | 5185158 - 5185472 | 12275.8 |
| hypothetical protein | CFA70_RS26315 | Not Available | Positive | 5185442 - 5186038 | 23687.5 |
| conjugal transfer protein trad | CFA70_RS26320 | Not Available | Positive | 5186138 - 5186461 | 12367.3 |
| type 4 pilus major pilin | CFA70_RS26325 | Not Available | Positive | 5187030 - 5187599 | 19168.2 |
| duf968 domain-containing protein | CFA70_RS30050 | Not Available | Positive | 5187723 - 5188010 | 9711.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

