Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CFA70_RS25625 | Not Available | Negative | 5045880 - 5047292 | 50953.3 |
| multidrug efflux rnd transporter permease subunit mdtc | CFA70_RS25630 | Not Available | Negative | 5047289 - 5050369 | 111065.0 |
| mdtb/muxb family multidrug efflux rnd transporter permease subunit | CFA70_RS25635 | Not Available | Negative | 5050370 - 5053492 | 111902.0 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | CFA70_RS25640 | Not Available | Negative | 5053492 - 5054739 | 44242.4 |
| type i toxin-antitoxin system ibs family toxin | CFA70_RS29150 | Not Available | Positive | 5055018 - 5055077 | 2193.03 |
| molecular chaperone | CFA70_RS25645 | Not Available | Negative | 5055177 - 5056529 | 49238.9 |
| dna-3-methyladenine glycosylase 2 | CFA70_RS25650 | Not Available | Positive | 5056666 - 5057535 | 31785.3 |
| diguanylate cyclase | CFA70_RS25655 | Not Available | Negative | 5057503 - 5060832 | 124666.0 |
| uridine kinase | CFA70_RS25665 | Not Available | Positive | 5061148 - 5061789 | 24480.6 |
| dctp deaminase | CFA70_RS25670 | Not Available | Positive | 5061881 - 5062462 | 21255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

