Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | CFA70_RS25160 | Not Available | Negative | 4953698 - 4954582 | 31744.8 |
| cidb/lrgb family autolysis modulator | CFA70_RS25165 | Not Available | Negative | 4954731 - 4955426 | 24383.0 |
| cida/lrga family protein | CFA70_RS25170 | Not Available | Negative | 4955423 - 4955821 | 14615.7 |
| lysr substrate-binding domain-containing protein | CFA70_RS25175 | Not Available | Negative | 4955953 - 4956861 | 33612.1 |
| mfs transporter | CFA70_RS25180 | Not Available | Positive | 4956988 - 4958346 | 48374.4 |
| gentisate 1,2-dioxygenase | CFA70_RS25185 | Not Available | Positive | 4958358 - 4959395 | 39176.2 |
| fumarylacetoacetate hydrolase family protein | CFA70_RS25190 | Not Available | Positive | 4959411 - 4960112 | 25971.9 |
| maleylacetoacetate isomerase | CFA70_RS25195 | Not Available | Positive | 4960121 - 4960765 | 23917.8 |
| duf968 domain-containing protein | CFA70_RS25200 | Not Available | Positive | 4960780 - 4961972 | 44320.8 |
| trna dihydrouridine(16) synthase dusc | CFA70_RS25205 | Not Available | Positive | 4962034 - 4962972 | 34740.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

