Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf968 domain-containing protein | CFA70_RS23705 | Not Available | Positive | 4655507 - 4655937 | 15832.3 |
| hypothetical protein | CFA70_RS29765 | Not Available | Positive | 4656093 - 4656734 | 25237.6 |
| hypothetical protein | CFA70_RS23715 | Not Available | Negative | 4656872 - 4657183 | 12167.7 |
| duf968 domain-containing protein | CFA70_RS23720 | Not Available | Negative | 4657184 - 4658161 | 36667.6 |
| hypothetical protein | CFA70_RS23725 | Not Available | Negative | 4658230 - 4658532 | 11143.1 |
| rhs element core protein | CFA70_RS23730 | Not Available | Negative | 4658536 - 4662591 | 152811.0 |
| type vi secretion system tip protein tssi/vgrg | CFA70_RS23735 | Not Available | Negative | 4662657 - 4664762 | 78141.6 |
| duf968 domain-containing protein | CFA70_RS23740 | Not Available | Positive | 4665517 - 4665657 | 5130.97 |
| phage integrase central domain-containing protein | CFA70_RS29770 | Not Available | Negative | 4666281 - 4666454 | 6538.02 |
| duf968 domain-containing protein | CFA70_RS29775 | Not Available | Negative | 4666559 - 4666657 | 3783.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

