Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsc family reductase | CFA70_RS23405 | Not Available | Negative | 4592804 - 4593160 | 13491.3 |
| protein ypfm | CFA70_RS29135 | Not Available | Positive | 4593549 - 4593608 | 2408.02 |
| multidrug efflux rnd transporter permease acrd | CFA70_RS23410 | Not Available | Negative | 4593684 - 4596797 | 113026.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | CFA70_RS23415 | Not Available | Negative | 4596982 - 4598679 | 63395.4 |
| formate-dependent uric acid utilization protein aega | CFA70_RS23420 | Not Available | Positive | 4598940 - 4600919 | 71866.0 |
| gdp-mannose pyrophosphatase nudk | CFA70_RS23425 | Not Available | Positive | 4601076 - 4601651 | 21634.8 |
| duf1176 domain-containing protein | CFA70_RS23430 | Not Available | Positive | 4601775 - 4602818 | 38603.4 |
| transketolase | CFA70_RS23435 | Not Available | Negative | 4602808 - 4604802 | 72751.2 |
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | CFA70_RS23445 | Not Available | Positive | 4605083 - 4607362 | 82173.9 |
| type vi secretion system paar protein | CFA70_RS23450 | Not Available | Negative | 4607610 - 4607894 | 9581.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

