Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | CFA70_RS23010 | Not Available | Negative | 4496062 - 4496382 | 11306.2 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | CFA70_RS23015 | Not Available | Negative | 4496382 - 4496900 | 20461.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | CFA70_RS23020 | Not Available | Negative | 4496897 - 4498258 | 50983.6 |
| dna-binding transcriptional regulator hcar | CFA70_RS23025 | Not Available | Positive | 4498394 - 4499287 | 32814.1 |
| rok family transcriptional regulator | CFA70_RS23030 | Not Available | Negative | 4499291 - 4500484 | 44216.8 |
| duf5107 domain-containing protein | CFA70_RS23035 | Not Available | Positive | 4500599 - 4503865 | 123025.0 |
| sugar porter family mfs transporter | CFA70_RS23040 | Not Available | Positive | 4503939 - 4505378 | 51569.1 |
| aldose 1-epimerase | CFA70_RS23045 | Not Available | Positive | 4505378 - 4506220 | 31526.7 |
| 3-phenylpropionate mfs transporter | CFA70_RS23050 | Not Available | Positive | 4506309 - 4507457 | 41822.1 |
| stationary phase inducible protein csie | CFA70_RS23055 | Not Available | Negative | 4507452 - 4508729 | 48750.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

