Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | CFA70_RS22855 | Not Available | Positive | 4463799 - 4464536 | 27358.6 |
| l-aspartate oxidase | CFA70_RS22860 | Not Available | Negative | 4464521 - 4466143 | 60170.6 |
| rpoe leader peptide rsed | CFA70_RS29130 | Not Available | Positive | 4466449 - 4466571 | 4657.92 |
| rna polymerase sigma factor rpoe | CFA70_RS22865 | Not Available | Positive | 4466568 - 4467143 | 21727.0 |
| anti-sigma-e factor rsea | CFA70_RS22870 | Not Available | Positive | 4467175 - 4467825 | 24214.8 |
| sigma-e factor regulatory protein rseb | CFA70_RS22875 | Not Available | Positive | 4467825 - 4468781 | 35808.8 |
| soxr-reducing system protein rsec | CFA70_RS22880 | Not Available | Positive | 4468778 - 4469242 | 16147.8 |
| translation elongation factor 4 | CFA70_RS22885 | Not Available | Positive | 4469513 - 4471312 | 66595.2 |
| signal peptidase i | CFA70_RS22890 | Not Available | Positive | 4471328 - 4472302 | 35975.4 |
| ribonuclease iii | CFA70_RS22900 | Not Available | Positive | 4472572 - 4473252 | 25507.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

