Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inovirus gp2 family protein | CFA70_RS22420 | Not Available | Positive | 4371261 - 4371893 | 24441.0 |
| integrase | CFA70_RS22425 | Not Available | Negative | 4371980 - 4373221 | 46784.2 |
| Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 4373425 - 4373788 | Not Available |
| hlyd family efflux transporter periplasmic adaptor subunit | CFA70_RS22435 | Not Available | Negative | 4373861 - 4375024 | 43121.1 |
| type i secretion system permease/atpase | CFA70_RS22440 | Not Available | Negative | 4375032 - 4377218 | 80523.4 |
| tolc family outer membrane protein | CFA70_RS22445 | Not Available | Negative | 4377215 - 4378624 | 51542.9 |
| bapa/bap/lapf family large adhesin | CFA70_RS22450 | Not Available | Negative | 4378725 - 4389929 | 374450.0 |
| ssra-binding protein smpb | CFA70_RS22455 | Not Available | Negative | 4390513 - 4390995 | 18184.0 |
| type ii toxin-antitoxin system toxin rata | CFA70_RS22460 | Not Available | Positive | 4391150 - 4391593 | 16383.8 |
| rnfh family protein | CFA70_RS22465 | Not Available | Positive | 4391577 - 4391873 | 11017.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

