Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-virulence regulator cigr family protein | CFA70_RS22365 | Not Available | Positive | 4358155 - 4358664 | 17663.9 |
| sigma-54 interaction domain-containing protein | CFA70_RS22370 | Not Available | Negative | 4358743 - 4360491 | 64931.2 |
| is1-like element is1b family transposase | CFA70_RS22375 | Not Available | Negative | 4360525 - 4361222 | 26558.3 |
| duf968 domain-containing protein | CFA70_RS22385 | Not Available | Positive | 4361277 - 4363277 | 72949.0 |
| atp-binding protein | CFA70_RS22390 | Not Available | Positive | 4363281 - 4364597 | 48987.1 |
| dead/deah box helicase | CFA70_RS22395 | Not Available | Positive | 4364594 - 4366789 | 81361.9 |
| hypothetical protein | CFA70_RS29990 | Not Available | Negative | 4366839 - 4366967 | 4626.62 |
| hypothetical protein | CFA70_RS22400 | Not Available | Negative | 4367160 - 4368554 | 52807.1 |
| is1-like element is1b family transposase | CFA70_RS22410 | Not Available | Positive | 4368723 - 4369420 | 26558.3 |
| yfji family protein | CFA70_RS22415 | Not Available | Positive | 4369603 - 4370961 | 52134.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

