Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| papb/focb family fimbrial expression transcriptional regulator | CFA70_RS22210 | Not Available | Negative | 4324424 - 4324768 | 12906.2 |
| hypothetical protein | CFA70_RS22215 | Not Available | Positive | 4325423 - 4326097 | 25557.8 |
| hypothetical protein | CFA70_RS22220 | Not Available | Negative | 4326222 - 4326797 | 21831.5 |
| papb/focb family fimbrial expression transcriptional regulator | CFA70_RS22225 | Not Available | Negative | 4326817 - 4327113 | 11066.5 |
| sensor domain-containing diguanylate cyclase | CFA70_RS22230 | Not Available | Positive | 4327863 - 4329233 | 52152.8 |
| tripartite tricarboxylate transporter permease | CFA70_RS22235 | Not Available | Negative | 4329290 - 4330804 | 52575.0 |
| tripartite tricarboxylate transporter tctb family protein | CFA70_RS22240 | Not Available | Negative | 4330815 - 4331249 | 15886.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CFA70_RS22245 | Not Available | Negative | 4331264 - 4332241 | 35499.9 |
| transcriptional regulator tctd | CFA70_RS22250 | Not Available | Positive | 4332395 - 4333069 | 25180.6 |
| sensor histidine kinase | CFA70_RS22255 | Not Available | Positive | 4333056 - 4334507 | 54377.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

