Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | CFA70_RS21800 | Not Available | Negative | 4247753 - 4248646 | 33974.8 |
| c4-dicarboxylate transporter dcuc | CFA70_RS21805 | Not Available | Positive | 4249000 - 4250367 | 47957.6 |
| nad-dependent malic enzyme | CFA70_RS21810 | Not Available | Positive | 4250420 - 4252114 | 62313.8 |
| nitrous oxide-stimulated promoter family protein | CFA70_RS21815 | Not Available | Positive | 4252199 - 4252543 | 13585.7 |
| formate hydrogenlyase transcriptional activator flha | CFA70_RS21820 | Not Available | Negative | 4252646 - 4254724 | 78229.3 |
| hydrogenase expression/formation protein hype | CFA70_RS21825 | Not Available | Negative | 4254852 - 4255862 | 35139.6 |
| hydrogenase formation protein hypd | CFA70_RS21830 | Not Available | Negative | 4255859 - 4256980 | 41453.8 |
| hydrogenase 3 maturation protein hypc | CFA70_RS21835 | Not Available | Negative | 4256981 - 4257253 | 9783.68 |
| hydrogenase nickel incorporation protein hypb | CFA70_RS21840 | Not Available | Negative | 4257244 - 4258116 | 31376.4 |
| hydrogenase maturation nickel metallochaperone hypa | CFA70_RS21845 | Not Available | Negative | 4258220 - 4258591 | 13843.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

