Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein hydrolase activator nlpd | CFA70_RS21705 | Not Available | Positive | 4228880 - 4229962 | 37853.4 |
| rna polymerase sigma factor rpos | CFA70_RS21710 | Not Available | Positive | 4230025 - 4231017 | 38007.0 |
| marr family winged helix-turn-helix transcriptional regulator | CFA70_RS21715 | Not Available | Negative | 4231160 - 4231564 | 15573.8 |
| non-oxidative hydroxyarylic acid decarboxylases subunit b | CFA70_RS21720 | Not Available | Positive | 4231723 - 4232316 | 21533.3 |
| non-oxidative hydroxyarylic acid decarboxylases subunit c | CFA70_RS21725 | Not Available | Positive | 4232316 - 4233743 | 52454.9 |
| non-oxidative hydroxyarylic acid decarboxylases subunit d | CFA70_RS21730 | Not Available | Positive | 4233754 - 4233990 | 9134.03 |
| hok/gef family protein | CFA70_RS21735 | Not Available | Positive | 4234231 - 4234383 | 5670.28 |
| dna mismatch repair protein muts | CFA70_RS21740 | Not Available | Negative | 4234496 - 4237063 | 95397.5 |
| hypothetical protein | CFA70_RS21745 | Not Available | Negative | 4237270 - 4237782 | 19131.9 |
| winged helix-turn-helix domain-containing protein | CFA70_RS21750 | Not Available | Negative | 4237782 - 4238567 | 29579.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

