Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase csda | CFA70_RS21400 | Not Available | Negative | 4164380 - 4165585 | 42860.2 |
| ygdi/ygdr family lipoprotein | CFA70_RS21405 | Not Available | Positive | 4165778 - 4166005 | 8144.64 |
| glycine cleavage system transcriptional regulator gcva | CFA70_RS21410 | Not Available | Positive | 4166369 - 4167286 | 34366.4 |
| duf423 domain-containing protein | CFA70_RS21415 | Not Available | Positive | 4167305 - 4167700 | 14440.1 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | CFA70_RS21420 | Not Available | Positive | 4167693 - 4168793 | 41903.6 |
| l-fucose operon activator | CFA70_RS21425 | Not Available | Negative | 4168829 - 4169557 | 27192.4 |
| l-fucose mutarotase | CFA70_RS21430 | Not Available | Negative | 4169615 - 4170037 | 15349.8 |
| l-fuculokinase | CFA70_RS21435 | Not Available | Negative | 4170039 - 4171457 | 52063.2 |
| l-fucose isomerase | CFA70_RS21440 | Not Available | Negative | 4171580 - 4173355 | 64996.4 |
| hypothetical protein | CFA70_RS29380 | Not Available | Negative | 4173585 - 4173785 | 7352.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

