Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | CFA70_RS21195 | Not Available | Positive | 4118236 - 4118508 | 10123.4 |
| amino acid permease | CFA70_RS21200 | Not Available | Negative | 4118562 - 4119791 | 44890.6 |
| multidrug/biocide efflux pace transporter | CFA70_RS21205 | Not Available | Negative | 4119934 - 4120389 | 17471.6 |
| lysr family transcriptional regulator | CFA70_RS21210 | Not Available | Positive | 4120491 - 4121375 | 32817.4 |
| acetyl-coa c-acetyltransferase | CFA70_RS21215 | Not Available | Positive | 4121478 - 4122656 | 41327.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | CFA70_RS21220 | Not Available | Positive | 4123127 - 4123963 | 31130.3 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | CFA70_RS21225 | Not Available | Positive | 4124021 - 4124782 | 27099.6 |
| arabinose-proton symporter arae | CFA70_RS21230 | Not Available | Positive | 4125098 - 4126516 | 51701.6 |
| cupin domain-containing protein | CFA70_RS21235 | Not Available | Negative | 4126590 - 4126916 | 12178.6 |
| aspartate/glutamate racemase | CFA70_RS21240 | Not Available | Positive | 4127058 - 4127765 | 25817.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

