Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | CFA70_RS20340 | Not Available | Negative | 3952625 - 3953206 | 21724.8 |
| hcp family type vi secretion system effector | CFA70_RS29715 | Not Available | Positive | 3953460 - 3953939 | 17963.3 |
| hypothetical protein | CFA70_RS29720 | Not Available | Positive | 3953942 - 3954652 | 27510.1 |
| duf2645 family protein | CFA70_RS20350 | Not Available | Positive | 3954659 - 3954991 | 13122.4 |
| quorum sensing histidine kinase qsec | CFA70_RS20355 | Not Available | Negative | 3954999 - 3956348 | 50343.6 |
| quorum sensing response regulator transcription factor qseb | CFA70_RS20360 | Not Available | Negative | 3956345 - 3957004 | 24209.3 |
| ygiw/ydei family stress tolerance ob fold protein | CFA70_RS20365 | Not Available | Positive | 3957155 - 3957553 | 14155.7 |
| dna topoisomerase iv subunit a | CFA70_RS20370 | Not Available | Positive | 3957672 - 3959930 | 83938.4 |
| 1-acylglycerol-3-phosphate o-acyltransferase | CFA70_RS20375 | Not Available | Positive | 3960126 - 3960863 | 27415.9 |
| cell division protein ftsp | CFA70_RS20380 | Not Available | Positive | 3960935 - 3962347 | 51955.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

