Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | CFA70_RS20075 | Not Available | Negative | 3901994 - 3902209 | 8500.42 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | CFA70_RS20085 | Not Available | Positive | 3902446 - 3903459 | 36133.7 |
| urease accessory protein ureg | CFA70_RS20090 | Not Available | Negative | 3903497 - 3904114 | 22194.7 |
| urease accessory protein uref | CFA70_RS20095 | Not Available | Negative | 3904124 - 3904795 | 25241.0 |
| urease accessory protein uree | CFA70_RS20100 | Not Available | Negative | 3904795 - 3905253 | 16905.3 |
| urease subunit alpha | CFA70_RS20105 | Not Available | Negative | 3905262 - 3906965 | 60567.5 |
| urease subunit beta | CFA70_RS20110 | Not Available | Negative | 3906958 - 3907278 | 11716.0 |
| urease subunit gamma | CFA70_RS20115 | Not Available | Negative | 3907288 - 3907590 | 11098.6 |
| urease accessory protein ured | CFA70_RS20120 | Not Available | Negative | 3907601 - 3908425 | 30904.5 |
| anion permease | CFA70_RS20125 | Not Available | Negative | 3908547 - 3910010 | 52783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

