Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | CFA70_RS19860 | Not Available | Positive | 3859898 - 3861214 | 50459.6 |
| fic/doc family protein | CFA70_RS19865 | Not Available | Positive | 3861219 - 3861833 | 23060.7 |
| hypothetical protein | CFA70_RS19870 | Not Available | Negative | 3861830 - 3861988 | 5694.89 |
| hypothetical protein | CFA70_RS19875 | Not Available | Positive | 3862225 - 3863238 | 38714.4 |
| helix-turn-helix transcriptional regulator | CFA70_RS19880 | Not Available | Positive | 3863331 - 3863567 | 9173.97 |
| yfji family protein | CFA70_RS19885 | Not Available | Positive | 3863691 - 3865097 | 53789.9 |
| inovirus gp2 family protein | CFA70_RS19890 | Not Available | Positive | 3865289 - 3865909 | 23778.5 |
| duf968 domain-containing protein | CFA70_RS29695 | Not Available | Negative | 3866260 - 3866968 | 26558.1 |
| is1-like element transposase | CFA70_RS29700 | Not Available | Negative | 3866887 - 3867162 | 9902.97 |
| capsule biosynthesis protein | CFA70_RS19915 | Not Available | Positive | 3867890 - 3869041 | 43180.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

