Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator yiaj | CFA70_RS17240 | Not Available | Positive | 3348867 - 3349682 | 29857.0 |
| 4fe-4s dicluster domain-containing protein | CFA70_RS17245 | Not Available | Positive | 3349800 - 3350273 | 17056.7 |
| valine--pyruvate transaminase | CFA70_RS17250 | Not Available | Negative | 3350308 - 3351600 | 48345.7 |
| alpha-amylase | CFA70_RS17260 | Not Available | Negative | 3351735 - 3353765 | 75364.1 |
| protein bax | CFA70_RS17265 | Not Available | Positive | 3354082 - 3354906 | 30908.2 |
| d-xylose utilization transcriptional activator xylr | CFA70_RS17270 | Not Available | Negative | 3354951 - 3356129 | 44695.3 |
| xylose isomerase | CFA70_RS17275 | Not Available | Positive | 3356491 - 3357813 | 49590.5 |
| xylulokinase | CFA70_RS17280 | Not Available | Positive | 3357885 - 3359339 | 52561.2 |
| inner membrane protein yiab | CFA70_RS17285 | Not Available | Positive | 3359507 - 3359860 | 12993.6 |
| acyltransferase | CFA70_RS17290 | Not Available | Negative | 3359857 - 3360852 | 37425.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

