Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc/yloc family endoribonuclease | CFA70_RS16845 | Not Available | Negative | 3278454 - 3279317 | 33122.8 |
| ribonuclease ph | CFA70_RS16855 | Not Available | Positive | 3279443 - 3280159 | 25229.3 |
| orotate phosphoribosyltransferase | CFA70_RS16860 | Not Available | Positive | 3280225 - 3280866 | 23499.3 |
| nucleoid occlusion factor slma | CFA70_RS16865 | Not Available | Negative | 3280949 - 3281545 | 22865.8 |
| dutp diphosphatase | CFA70_RS16875 | Not Available | Negative | 3281662 - 3282120 | 16226.6 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | CFA70_RS16880 | Not Available | Negative | 3282098 - 3283318 | 43365.4 |
| radc family protein | CFA70_RS16885 | Not Available | Positive | 3283490 - 3284155 | 24999.5 |
| 50s ribosomal protein l28 | CFA70_RS16890 | Not Available | Positive | 3284374 - 3284610 | 9037.05 |
| 50s ribosomal protein l33 | CFA70_RS16895 | Not Available | Positive | 3284631 - 3284798 | 6371.94 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | CFA70_RS16900 | Not Available | Positive | 3284897 - 3285706 | 30220.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

