Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain 18-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter freundii strain 18-1 plasmid pA18-1, complete
Gene Summary
Adenine Count
38861 bp
Thymine Count
39496 bp
Guanine Count
39710 bp
Cytosine Count
41588 bp
Genome Length
159655 bp
Protein-coding Genes
174 genes
Non-Coding Genes
26 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase family protein | CFA70_RS16485 | Not Available | Positive | 3209041 - 3210054 | 37970.2 |
| transcriptional regulator uhpa | CFA70_RS16490 | Not Available | Positive | 3210208 - 3210801 | 20931.7 |
| signal transduction histidine-protein kinase/phosphatase uhpb | CFA70_RS16495 | Not Available | Positive | 3210798 - 3212300 | 56091.9 |
| mfs transporter | CFA70_RS16500 | Not Available | Positive | 3212310 - 3213638 | 48520.5 |
| hexose-6-phosphate:phosphate antiporter | CFA70_RS16505 | Not Available | Positive | 3213781 - 3215172 | 50768.7 |
| duf1198 family protein | CFA70_RS16510 | Not Available | Positive | 3215298 - 3215750 | 17433.4 |
| duf968 domain-containing protein | CFA70_RS16515 | Not Available | Positive | 3215851 - 3216215 | 13487.3 |
| helix-turn-helix domain-containing protein | CFA70_RS16520 | Not Available | Positive | 3216202 - 3216501 | 11033.5 |
| purine ribonucleoside efflux pump nepi | CFA70_RS16525 | Not Available | Positive | 3216620 - 3217813 | 41763.5 |
| hypothetical protein | CFA70_RS29355 | Not Available | Negative | 3217860 - 3218066 | 7650.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

